Preheat oven to 350 degrees. Brown pork and onions in hot oil in large ovenproof pot on medium-high heat 3 minutes, turning occasionally.
Combine bbq sauce, apple juice and thyme. Pour over ingredients in pot; cover with ovenproof lid. Simmer an additional 10 minutes, then place in oven.
Bake 2 hours. Add apples and prunes; bake an addional 30 minutes or until pork is cooked through and apples are tender.
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